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Biopython Tutorial

Biopython Tutorial

BySu Su

Biopython Tutorial Biopython is an open-source python tool mainly used in bioinformatics field. This tutorial walks through the basics of Biopython package, overview of bioinformatics, sequence manipulation and plotting, population genetics, cluster analysis, genome analysis, connecting with BioSQL databases and finally concludes with some examples. This tutorial is prepared for professionals who are aspiring to make a career in the field of bioinformatics programming using python as programming tool. This tutorial is intended to make you comfortable in getting started with the Biopython concepts and its various functions. Before proceeding with the various types of concepts given in this tutorial, it is being assumed that the readers are already aware about bioinformatics. In addition to this, it will be very helpful if the readers have a sound knowledge on Python.  *** Table of Contents: 1- Introduction 2- Installation 3- Creating Simple Application 4- Sequence 5- Advanced Sequence Operations 6- Sequence I/O Operations 7- Sequence Alignments 8- Overview of BLAST 9- Entrez Database 10- PDB Module 11- Motif Objects 12- BioSQL Module 13- Population Genetics 14- Genome Analysis 15- Phenotype Microarray 16- Plotting 17- Cluster Analysis 18- Machine Learning 19- Testing Techniques

Details

Publication Date
Sep 2, 2021
Language
English
Category
Computers & Technology
Copyright
All Rights Reserved - Standard Copyright License
Contributors
By (author): Su Su

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Format
PDF

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